C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11878
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117908 Gm11878-001 ENSMUSG00000081810 10090 + 4:22519628-22520027 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverMuscleOvaryPlacentaTestisENSMUST00000117908
Transcript ID Bladder Brain Liver Muscle Ovary Placenta Testis
ENSMUST00000117908 0.033±0.00 5.409±5.29 5.306±11.66 0.139±0.02 0.163±0.04 0.543±0.55 0.125±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00082C CIL_00082C_0002 VISTA 4:22000832-22603030

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360830 RPS24-003 protein_coding Homo_sapiens 0 453
ENST00000372360 RPS24-001 protein_coding Homo_sapiens 0 468
ENST00000424289 RP11-52I18.1-001 processed_pseudogene Homo_sapiens 0 300
ENST00000426577 RP3-417G15.1-001 processed_pseudogene Homo_sapiens 0 353
ENST00000431490 RPS24P8-001 processed_pseudogene Homo_sapiens 0 418
ENST00000435275 RPS24-201 protein_coding Homo_sapiens 0 455
ENST00000440692 RPS24-202 protein_coding Homo_sapiens 0 453
ENST00000444423 RP11-543E8.2-001 processed_pseudogene Homo_sapiens 0 346
ENST00000464716 RPS24-007 processed_transcript Homo_sapiens 0 453
ENST00000465692 RPS24-008 processed_transcript Homo_sapiens 0 448
ENST00000466129 RPS24-005 retained_intron Homo_sapiens 0 327
ENST00000475468 RPS24-004 processed_transcript Homo_sapiens 0 263
ENST00000476545 RPS24-009 processed_transcript Homo_sapiens 0 453
ENST00000478655 RPS24-006 retained_intron Homo_sapiens 0 453
ENST00000482069 RPS24-010 processed_transcript Homo_sapiens 0 464
ENST00000485708 RPS24-002 processed_transcript Homo_sapiens 0 453
ENST00000613865 RPS24-203 protein_coding Homo_sapiens 0 453

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