C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SET binding factor 1 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000444527 SBF1P1-001 ENSG00000248522 9606 - 8:55449509-55455139 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleTestisENST00000444527
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Testis
ENST00000444527 0.032±0.00 0.017±0.00 0.012±0.01 0.009±0.00 0.012±0.01 0.015±0.00 0.052±0.00 0.011±0.00 0.008±0.00 0.031±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000144585 Sbf1-003 protein_coding Mus_musculus 0 4634
ENSMUST00000123791 Sbf1-001 protein_coding Mus_musculus 0 3134
ENSMUST00000124576 Sbf1-002 nonsense_mediated_decay Mus_musculus 0 3114
ENSMUST00000175778 Sbf1-011 protein_coding Mus_musculus 0 747
ENSMUST00000124398 Sbf1-009 retained_intron Mus_musculus 0 542
ENSMUST00000155146 Sbf1-007 retained_intron Mus_musculus 0 379
ENSMUST00000124642 Sbf1-005 nonsense_mediated_decay Mus_musculus 0 351
ENSMUST00000176277 Sbf1-014 retained_intron Mus_musculus 0 268
ENSDART00000091599 sbf1-201 protein_coding Danio_rerio 0 243
ENSDART00000109452 sbf1-001 protein_coding Danio_rerio 0 243

Loading