C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SET binding factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000109452 sbf1-001 ENSDARG00000062968 7955 + 4:8973770-9062216 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverENSDART00000109452
Transcript ID Brain Heart Kidney Liver
ENSDART00000109452 11.398±2.28 3.027±0.93 1.184±0.00 1.233±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000123791 Sbf1-001 protein_coding Mus_musculus 0 944
ENSMUST00000124398 Sbf1-009 retained_intron Mus_musculus 0 298
ENSMUST00000124576 Sbf1-002 nonsense_mediated_decay Mus_musculus 0 944
ENSMUST00000144585 Sbf1-003 protein_coding Mus_musculus 0 414
ENSMUST00000175778 Sbf1-011 protein_coding Mus_musculus 0 278
ENST00000348911 SBF1-003 protein_coding Homo_sapiens 0 1131
ENST00000380817 SBF1-001 protein_coding Homo_sapiens 0 455
ENST00000390679 SBF1-201 protein_coding Homo_sapiens 0 1131
ENST00000418590 SBF1-005 protein_coding Homo_sapiens 0 283
ENST00000444527 SBF1P1-001 processed_pseudogene Homo_sapiens 0 243
ENST00000470434 SBF1-004 retained_intron Homo_sapiens 0 392

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