C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L21 pseudogene 33
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000444831 RPL21P33-001 ENSG00000237024 9606 + 2:60852260-60852743 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonLungENST00000444831
Transcript ID Adrenal Brain Colon Lung
ENST00000444831 0.145±0.00 0.090±0.00 0.027±0.00 0.054±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009DA CIL_0009DA_0001 VISTA 2:60267677-60869129
CIL_0008PG CIL_0008PG_0001 VISTA 2:60327921-60929753

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117861 Gm12760-001 processed_pseudogene Mus_musculus 0 257
ENSMUST00000120348 Gm12123-001 processed_pseudogene Mus_musculus 0 233
ENSMUST00000117461 Gm14657-001 processed_pseudogene Mus_musculus 0 193
ENSMUST00000120458 Gm7071-001 processed_pseudogene Mus_musculus 4e-39 165
ENSMUST00000120018 Gm13518-001 processed_pseudogene Mus_musculus 1e-33 147
ENSMUST00000119221 Gm12934-001 processed_pseudogene Mus_musculus 6e-22 108

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