C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12123
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120348 Gm12123-001 ENSMUSG00000082309 10090 - 11:35323199-35323670 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLungOvaryTestisENSMUST00000120348
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Lung Ovary Testis
ENSMUST00000120348 0.842±0.17 0.668±0.29 0.175±0.00 1.711±0.83 0.115±0.00 0.725±0.00 0.717±0.31 1.655±1.26 0.173±0.07

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000247219 TBPL2-001 protein_coding Homo_sapiens 0 233
ENST00000272274 RPL21-003 protein_coding Homo_sapiens 0 505
ENST00000311549 RPL21-001 protein_coding Homo_sapiens 0 505
ENST00000319826 RPL21-004 protein_coding Homo_sapiens 0 505
ENST00000326092 RPL21-005 protein_coding Homo_sapiens 0 505
ENST00000396599 RPL21P75-001 processed_pseudogene Homo_sapiens 0 499
ENST00000397467 RPL21P17-001 processed_pseudogene Homo_sapiens 0 457
ENST00000401418 RPL21P28-001 processed_pseudogene Homo_sapiens 0 492
ENST00000403842 RP11-203F10.6-001 processed_pseudogene Homo_sapiens 0 466
ENST00000413752 RPL21P24-001 processed_pseudogene Homo_sapiens 0 261
ENST00000415692 RP11-248J23.5-001 processed_pseudogene Homo_sapiens 0 351
ENST00000416622 RP11-329A14.2-001 processed_pseudogene Homo_sapiens 0 344
ENST00000417077 RP11-339A7.1-001 processed_pseudogene Homo_sapiens 0 409
ENST00000417698 RPL21P50-001 processed_pseudogene Homo_sapiens 0 255
ENST00000422509 RP11-405L18.4-001 processed_pseudogene Homo_sapiens 0 355
ENST00000434936 RP11-319C21.1-001 processed_pseudogene Homo_sapiens 1e-33 147
ENST00000440049 RPL21P2-001 processed_pseudogene Homo_sapiens 0 405
ENST00000441274 RP11-490K7.1-001 processed_pseudogene Homo_sapiens 0 394
ENST00000443666 RPL21P133-001 processed_pseudogene Homo_sapiens 0 335
ENST00000444831 RPL21P33-001 processed_pseudogene Homo_sapiens 0 233
ENST00000456604 AC013429.4-001 processed_pseudogene Homo_sapiens 8.99999e-40 167
ENST00000461458 RPL21P11-001 processed_pseudogene Homo_sapiens 0 472
ENST00000461690 RPL21-007 nonsense_mediated_decay Homo_sapiens 0 477
ENST00000463655 CTC-209L16.1-001 processed_pseudogene Homo_sapiens 0 303
ENST00000465083 RPL21P8-001 processed_pseudogene Homo_sapiens 0 243
ENST00000466550 RPL21-006 retained_intron Homo_sapiens 0 313
ENST00000469899 RPL21P18-001 processed_pseudogene Homo_sapiens 0 396
ENST00000472300 RP11-16F15.2-001 processed_pseudogene Homo_sapiens 0 483
ENST00000473558 RPL21-002 retained_intron Homo_sapiens 4.06377e-44 182
ENST00000477341 RP11-734J24.1-001 processed_pseudogene Homo_sapiens 0 466
ENST00000479116 RP11-73B8.1-001 processed_pseudogene Homo_sapiens 0 387
ENST00000479171 RPL21P6-001 processed_pseudogene Homo_sapiens 0 233
ENST00000480369 RP11-1110J8.1-001 processed_pseudogene Homo_sapiens 0 219
ENST00000480465 RP11-492M23.2-001 processed_pseudogene Homo_sapiens 0 472
ENST00000484462 RPL21P119-001 processed_pseudogene Homo_sapiens 0 492
ENST00000486904 RP11-731J8.1-001 processed_pseudogene Homo_sapiens 0 388
ENST00000488305 RPL21P13-001 processed_pseudogene Homo_sapiens 0 361
ENST00000493317 RPL21-009 protein_coding Homo_sapiens 0 416
ENST00000493462 RP3-522P13.1-001 processed_pseudogene Homo_sapiens 0 424
ENST00000495531 RP11-572P18.1-001 processed_pseudogene Homo_sapiens 0 505
ENST00000497298 RPL21P131-001 processed_pseudogene Homo_sapiens 0 446
ENST00000557463 RPL21P7-001 processed_pseudogene Homo_sapiens 0 422
ENST00000603164 AC005776.1-001 processed_pseudogene Homo_sapiens 0 191

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