C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000447284 RP11-312J18.3-001 ENSG00000226003 9606 + 1:160848010-160848502 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonKidneyMusclePlacentaENST00000447284
Transcript ID Adipose Adrenal Colon Kidney Muscle Placenta
ENST00000447284 0.027±0.00 0.028±0.00 0.539±0.51 0.439±0.00 0.024±0.00 0.116±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 496
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 488
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 486
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 486
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 481
ENSMUST00000075293 E030024N20Rik-001 processed_pseudogene Mus_musculus 0 473
ENSMUST00000119740 Gm12728-001 translated_processed_pseudogene Mus_musculus 0 473
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 466
ENSMUST00000178933 Gm5558-201 processed_pseudogene Mus_musculus 0 466
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 462
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 462
ENSMUST00000081336 Gm6065-201 processed_pseudogene Mus_musculus 0 449
ENSMUST00000099961 Gm6043-201 processed_pseudogene Mus_musculus 0 442
ENSMUST00000117621 Gm13750-001 processed_pseudogene Mus_musculus 0 435
ENSMUST00000177265 Gm5777-001 processed_pseudogene Mus_musculus 0 425
ENSMUST00000119751 Gm11469-001 processed_pseudogene Mus_musculus 0 418
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 418
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 411
ENSMUST00000120735 Gm5883-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000186816 RP23-215C21.3-001 processed_pseudogene Mus_musculus 0 399
ENSMUST00000121819 Gm6044-001 processed_pseudogene Mus_musculus 0 375
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 364
ENSMUST00000119162 Gm15621-001 processed_pseudogene Mus_musculus 0 335
ENSMUST00000117298 Gm12842-001 processed_pseudogene Mus_musculus 0 303
ENSMUST00000121223 Gm12632-001 processed_pseudogene Mus_musculus 0 265
ENSMUST00000118166 Gm13454-001 processed_pseudogene Mus_musculus 9.80909e-45 183
ENSMUST00000069552 Gm5160-201 protein_coding Mus_musculus 6e-32 141

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