C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 280C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000447817 ZNF280C-002 ENSG00000056277 9606 - X:130215193-130268883 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungOvaryENST00000447817
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Ovary
ENST00000447817 0.415±0.00 0.528±0.00 0.701±0.00 0.661±0.00 0.788±0.00 0.527±0.00 0.283±0.00 1.721±0.00 0.579±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000SX CIL_0000SX_0001 CGP X:130171649-130268899
CIL_0000SW CIL_0000SW_0001 CGP X:130202711-130373361

Gene Ontology

GO IDEvidence TypeGO Description
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072292 Zfp280c-002 protein_coding Mus_musculus 0 734
ENSMUST00000114940 Zfp280c-003 protein_coding Mus_musculus 0 728
ENSMUST00000088898 Zfp280c-004 protein_coding Mus_musculus 0 728
ENSMUST00000076635 Zfp280c-001 protein_coding Mus_musculus 0 728
ENSMUST00000183801 Zfp280d-021 nonsense_mediated_decay Mus_musculus 0 701
ENSMUST00000183410 Zfp280d-020 protein_coding Mus_musculus 0 701
ENSMUST00000098576 Zfp280d-011 protein_coding Mus_musculus 0 701
ENSMUST00000184517 Zfp280d-003 protein_coding Mus_musculus 0 701
ENSMUST00000184036 Zfp280d-001 protein_coding Mus_musculus 0 686
ENSMUST00000184053 Zfp280d-010 nonsense_mediated_decay Mus_musculus 0 440
ENSMUST00000184399 Zfp280d-002 nonsense_mediated_decay Mus_musculus 0 440
ENSMUST00000185020 Zfp280d-007 nonsense_mediated_decay Mus_musculus 0 387
ENSMUST00000184786 Zfp280d-006 nonsense_mediated_decay Mus_musculus 0 379
ENSMUST00000183400 Zfp280d-012 retained_intron Mus_musculus 2.00386e-43 182

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