C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 280D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183400 Zfp280d-012 ENSMUSG00000038535 10090 + 9:72274981-72299175 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000183400
Transcript ID Testis
ENSMUST00000183400 13.491±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TG CIL_0007TG_0002 VISTA 9:71674986-72275900
CIL_0008VA CIL_0008VA_0002 VISTA 9:71675967-72276730
CIL_0004OY CIL_0004OY_0002 CGP 9:71842688-72363777

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267807 ZNF280D-003 protein_coding Homo_sapiens 0 292
ENST00000370978 ZNF280C-001 protein_coding Homo_sapiens 3.9937e-43 182
ENST00000447817 ZNF280C-002 protein_coding Homo_sapiens 2.00386e-43 182
ENST00000558002 ZNF280D-004 nonsense_mediated_decay Homo_sapiens 0 292
ENST00000559237 ZNF280D-001 protein_coding Homo_sapiens 1e-20 104
ENST00000559352 ZNF280D-014 protein_coding Homo_sapiens 0.000000000000001 88
ENST00000560298 ZNF280D-013 processed_transcript Homo_sapiens 0.000000000000004 86

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