C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: heat shock 70kDa protein 8 pseudogene 20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000448737 HSPA8P20-001 ENSG00000234564 9606 - X:124204499-124205806 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartMuscleENST00000448737
Transcript ID Heart Muscle
ENST00000448737 0.010±0.00 0.010±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000GB CIL_0000GB_0002 CGP X:123859724-124422664
CIL_0007YQ CIL_0007YQ_0001 VISTA X:123916977-124518737
CIL_0000AX CIL_0000AX_0001 CGP X:123960212-124422664

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117405 Gm15459-001 processed_pseudogene Mus_musculus 0 490
ENSMUST00000015800 Hspa8-001 protein_coding Mus_musculus 0 484
ENSMUST00000187358 RP23-241J21.1-001 processed_pseudogene Mus_musculus 0 420
ENSMUST00000149936 Hspa8-002 retained_intron Mus_musculus 0 379
ENSMUST00000188705 RP23-76C10.2-001 processed_pseudogene Mus_musculus 0 370
ENSMUST00000122434 Gm13437-001 processed_pseudogene Mus_musculus 0 340
ENSMUST00000117557 Hspa8-003 protein_coding Mus_musculus 0 207
ENSMUST00000140984 Hspa8-007 retained_intron Mus_musculus 0 207
ENSMUST00000190856 RP24-302H24.1-001 processed_pseudogene Mus_musculus 2.99878e-43 180

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