C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: replication termination factor 2 domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000449062 RTFDC1-006 ENSG00000022277 9606 + 20:56468678-56517201 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000449062
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000449062 22.324±0.00 15.736±0.00 2.460±0.00 21.886±14.17 9.918±2.49 11.851±6.55 2.457±0.00 7.116±0.00 6.527±0.00 4.627±0.00 17.964±8.10 30.568±0.00 14.712±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099D CIL_00099D_0001 VISTA 20:56155251-56756351
CIL_00036G CIL_00036G_0001 CGP 20:56412112-56519449
CIL_00015M CIL_00015M_0002 CGP 20:56468585-56525925

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109132 Rtfdc1-003 retained_intron Mus_musculus 0 664
ENSMUST00000029005 Rtfdc1-001 protein_coding Mus_musculus 0 664
ENSMUST00000140048 Rtfdc1-002 processed_transcript Mus_musculus 0 222

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