C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7 pseudogene 52
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000449200 RPL7P52-001 ENSG00000228599 9606 - 22:40106325-40107066 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLungOvaryTestisENST00000449200
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Lung Ovary Testis
ENST00000449200 0.150±0.00 0.346±0.00 0.052±0.00 0.118±0.00 0.335±0.32 0.190±0.00 0.049±0.00 0.085±0.00 0.123±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005W3 CIL_0005W3_0001 CGP 22:39994949-40335808
CIL_0006F2 CIL_0006F2_0001 CGP 22:40044817-40369367

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058437 Rpl7-001 protein_coding Mus_musculus 0 715
ENSMUST00000119853 Gm12174-001 processed_pseudogene Mus_musculus 0 688
ENSMUST00000027054 Gm5045-201 processed_pseudogene Mus_musculus 0 676
ENSMUST00000118173 Gm6274-001 processed_pseudogene Mus_musculus 0 660
ENSMUST00000141217 Rpl7-002 retained_intron Mus_musculus 0 468
ENSMUST00000151017 Rpl7-005 retained_intron Mus_musculus 0 237
ENSMUST00000140597 Rpl7-006 processed_transcript Mus_musculus 0 237

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