C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: FYVE, RhoGEF and PH domain containing 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000451107 FGD6-003 ENSG00000180263 9606 - 12:95081398-95217482 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastMuscleENST00000451107
Transcript ID Breast Muscle
ENST00000451107 0.478±0.00 0.182±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005XD CIL_0005XD_0002 CGP 12:95020229-95217482
CIL_0000Y0 CIL_0000Y0_0002 CGP 12:95076749-95302790

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020208 Fgd6-001 protein_coding Mus_musculus 0 2121
ENSMUST00000141143 Fgd6-002 processed_transcript Mus_musculus 0 220
ENSMUST00000125535 Fgd6-003 retained_intron Mus_musculus 2e-23 115

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