C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene, 20302
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000080671 RP24-511K23.2-001 ENSMUSG00000101219 10090 + 1:105574537-105574811 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000080671
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000080671 0.451±0.05 0.649±0.00 0.305±0.00 0.226±0.10 2.723±0.00 0.328±0.00 0.445±0.19 0.599±0.58 0.761±0.37 0.470±0.30 2.359±1.27 0.477±0.42 0.707±0.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007FF CIL_0007FF_0002 CGP 1:105276914-105663677
CIL_00055U CIL_00055U_0002 CGP 1:105518422-105755191

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000359681 RPL37A-005 retained_intron Homo_sapiens 0 287
ENST00000420712 RPL37A-006 nonsense_mediated_decay Homo_sapiens 6e-36 154
ENST00000427280 RPL37A-010 protein_coding Homo_sapiens 0 252
ENST00000441179 RPL37A-013 protein_coding Homo_sapiens 0 252
ENST00000446558 RPL37A-008 protein_coding Homo_sapiens 0 252
ENST00000451614 RP11-365F18.1-001 processed_pseudogene Homo_sapiens 0 206
ENST00000456586 RPL37A-007 protein_coding Homo_sapiens 0 287
ENST00000478153 RPL37A-004 retained_intron Homo_sapiens 0 252
ENST00000487233 RPL37A-002 retained_intron Homo_sapiens 4e-35 154
ENST00000490649 RPL37A-003 retained_intron Homo_sapiens 0 252
ENST00000491306 RPL37A-001 protein_coding Homo_sapiens 0 287
ENST00000598925 RPL37A-009 protein_coding Homo_sapiens 0 252
ENST00000600880 RPL37A-011 protein_coding Homo_sapiens 0 252

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