C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L37a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000059980 Rpl37a-201 ENSMUSG00000046330 10090 + 1:72711260-72713809 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000059980
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000059980 257.326±95.61 81.522±3.63 827.250±131.34 296.393±159.41 225.255±76.79 301.035±59.08 138.621±29.18 226.080±102.25 408.815±332.13 212.034±38.71 191.694±13.71 367.492±124.31 455.389±107.33 224.456±58.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005MF CIL_0005MF_0002 CGP 1:72711260-72852474

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005634 IEA nucleus
GO:0005925 IEA focal adhesion
GO:0006412 IEA translation
GO:0022625 IEA cytosolic large ribosomal subunit
GO:0044822 IEA poly(A) RNA binding
GO:0046872 IEA metal ion binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000359681 RPL37A-005 retained_intron Homo_sapiens 0 385
ENST00000420712 RPL37A-006 nonsense_mediated_decay Homo_sapiens 0 211
ENST00000427280 RPL37A-010 protein_coding Homo_sapiens 0 300
ENST00000441179 RPL37A-013 protein_coding Homo_sapiens 0 298
ENST00000446558 RPL37A-008 protein_coding Homo_sapiens 0 320
ENST00000451614 RP11-365F18.1-001 processed_pseudogene Homo_sapiens 0 272
ENST00000456586 RPL37A-007 protein_coding Homo_sapiens 0 385
ENST00000478153 RPL37A-004 retained_intron Homo_sapiens 0 300
ENST00000487233 RPL37A-002 retained_intron Homo_sapiens 0 211
ENST00000490649 RPL37A-003 retained_intron Homo_sapiens 0 327
ENST00000491306 RPL37A-001 protein_coding Homo_sapiens 0 424
ENST00000494116 RPL37AP8-001 processed_pseudogene Homo_sapiens 0 300
ENST00000598925 RPL37A-009 protein_coding Homo_sapiens 0 300
ENST00000600880 RPL37A-011 protein_coding Homo_sapiens 0 316

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