C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000451892 RP11-567G24.1-001 ENSG00000228818 9606 - 1:240142670-240145389 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMusclePlacentaTestisENST00000451892
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Placenta Testis
ENST00000451892 0.017±0.00 0.025±0.00 0.018±0.00 0.121±0.04 0.026±0.00 0.018±0.00 0.017±0.00 0.019±0.00 0.006±0.00 0.012±0.00 0.081±0.00 0.018±0.00 0.017±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006KG CIL_0006KG_0001 CGP 1:240014348-240612149

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000007212 Psmd2-001 protein_coding Mus_musculus 0 3238
ENSMUST00000172207 Psmd2-002 nonsense_mediated_decay Mus_musculus 0 3112
ENSMUST00000050717 Gm5422-201 protein_coding Mus_musculus 0 2985
ENSMUST00000169184 Psmd2-007 processed_transcript Mus_musculus 0 664
ENSMUST00000166071 Psmd2-006 processed_transcript Mus_musculus 0 326
ENSMUST00000169195 Psmd2-004 processed_transcript Mus_musculus 0 285
ENSMUST00000167869 Psmd2-005 processed_transcript Mus_musculus 0 230

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