C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000453000 CABP1-004 ENSG00000157782 9606 + 12:120655299-120667324 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverMuscleOvaryPlacentaENST00000453000
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Muscle Ovary Placenta
ENST00000453000 0.115±0.00 0.828±0.00 13.063±0.00 0.564±0.30 0.216±0.16 1.256±0.00 0.100±0.09 0.074±0.00 0.248±0.06 0.220±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZA CIL_0007ZA_0001 VISTA 12:120240385-120840841

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031519 Cabp1-001 protein_coding Mus_musculus 0 1284
ENSMUST00000112109 Cabp1-006 protein_coding Mus_musculus 0 1264
ENSMUST00000112113 Cabp1-004 protein_coding Mus_musculus 0 1079
ENSMUST00000145197 Cabp1-002 nonsense_mediated_decay Mus_musculus 0 977
ENSMUST00000112112 Cabp1-003 protein_coding Mus_musculus 0 824
ENSMUST00000151775 Cabp1-005 processed_transcript Mus_musculus 0 640
ENSDART00000018528 cabp5a-201 protein_coding Danio_rerio 6.99949e-42 176
ENSDART00000144067 cabp5a-001 protein_coding Danio_rerio 6.99949e-42 176

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