C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SEC16 homolog A (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000453963 SEC16A-005 ENSG00000148396 9606 - 9:136440101-136467051 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000453963
Transcript ID Adrenal Bladder Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000453963 2.886±0.00 0.866±0.00 2.462±0.00 0.718±0.42 1.504±0.66 5.713±0.00 2.869±0.00 2.576±1.52 4.680±3.03 2.188±0.97 4.610±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003X7 CIL_0003X7_0001 CGP 9:136428619-136483759

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0048208 IEA COPII vesicle coating

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000091252 Sec16a-201 protein_coding Mus_musculus 0 1727
ENSMUST00000114082 Sec16a-001 protein_coding Mus_musculus 0 1727
ENSMUST00000156442 Sec16a-002 protein_coding Mus_musculus 0 1347
ENSMUST00000148306 Sec16a-004 processed_transcript Mus_musculus 0 200

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