C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: growth arrest-specific 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000454584 GAS2-001 ENSG00000148935 9606 + 11:22666615-22813055 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderHeartLiverLungOvaryENST00000454584
Transcript ID Bladder Heart Liver Lung Ovary
ENST00000454584 0.414±0.00 1.084±0.46 1.099±0.00 0.362±0.07 0.675±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003FU CIL_0003FU_0001 CGP 11:22338097-22626787
CIL_00088G CIL_00088G_0001 VISTA 11:22474995-23077197
CIL_0004AS CIL_0004AS_0002 CGP 11:22622519-22813055
CIL_0000L8 CIL_0000L8_0001 CGP 11:22625642-22830299

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005829 TAS cytosol
GO:0005884 TAS actin filament
GO:0006915 TAS apoptotic process
GO:0006921 TAS cellular component disassembly involved in execution phase of apoptosis
GO:0007050 IEA cell cycle arrest
GO:0008360 IEA regulation of cell shape
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107591 Gas2-002 protein_coding Mus_musculus 0 1247
ENSMUST00000051912 Gas2-001 protein_coding Mus_musculus 0 1247
ENSMUST00000129604 Gas2-003 nonsense_mediated_decay Mus_musculus 0 1029
ENSMUST00000107589 Gas2-004 protein_coding Mus_musculus 0 959
ENSMUST00000145049 Gas2-006 protein_coding Mus_musculus 0 728
ENSMUST00000155925 Gas2-007 processed_transcript Mus_musculus 0 263

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