C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: growth arrest specific 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000051912 Gas2-001 ENSMUSG00000030498 10090 + 7:51878967-51994453 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000051912
Transcript ID Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000051912 0.416±0.08 1.171±0.00 0.798±0.00 0.452±0.06 62.949±4.19 5.293±4.34 0.508±0.11 3.397±1.97 0.538±0.33 0.195±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003FU CIL_0003FU_0002 CGP 7:51621830-51862267
CIL_00088G CIL_00088G_0002 VISTA 7:51668458-52270961
CIL_0004AS CIL_0004AS_0003 CGP 7:51860577-51994975
CIL_0000L8 CIL_0000L8_0002 CGP 7:51862015-52006018

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0006915 IEA apoptotic process
GO:0007050 IEA cell cycle arrest
GO:0008360 IEA regulation of cell shape
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000278187 GAS2-002 protein_coding Homo_sapiens 0 1245
ENST00000454584 GAS2-001 protein_coding Homo_sapiens 0 1247
ENST00000524701 GAS2-003 nonsense_mediated_decay Homo_sapiens 0 726
ENST00000528582 GAS2-010 protein_coding Homo_sapiens 0 717
ENST00000532398 GAS2-005 protein_coding Homo_sapiens 0 821
ENST00000533092 GAS2-008 processed_transcript Homo_sapiens 0 370
ENST00000533363 GAS2-007 protein_coding Homo_sapiens 0 525
ENST00000534801 GAS2-006 protein_coding Homo_sapiens 0 588

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