C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gamma-glutamylamine cyclotransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000455100 GGACT-201 ENSG00000134864 9606 - 13:100530164-100533802 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMusclePlacentaTestisENST00000455100
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Placenta Testis
ENST00000455100 1.452±0.00 2.373±0.00 5.861±0.00 2.233±0.00 1.850±0.95 3.041±0.00 1.579±0.00 8.992±0.00 5.817±0.00 0.849±0.05 0.691±0.00 2.380±0.00 3.494±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004G2 CIL_0004G2_0002 CGP 13:99981772-100530435
CIL_0000WI CIL_0000WI_0001 CGP 13:100089015-100589528
CIL_0005NV CIL_0005NV_0001 CGP 13:100530164-100675093

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003839 IDA gamma-glutamylcyclotransferase activity
GO:0042219 IDA cellular modified amino acid catabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000140517 Pcca-002 processed_transcript Mus_musculus 0 307
ENSMUST00000038374 Pcca-001 protein_coding Mus_musculus 0 279
ENSMUST00000138836 Pcca-012 retained_intron Mus_musculus 0 196
ENSMUST00000177312 Pcca-013 nonsense_mediated_decay Mus_musculus 0 196
ENSMUST00000152383 Pcca-003 nonsense_mediated_decay Mus_musculus 0 191
ENSMUST00000132444 Pcca-011 protein_coding Mus_musculus 2.00386e-43 182

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