C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005NV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000134864-ENSG00000125247 CGP 9606 13:100530164-100675093
GeneTranscriptPositionBiotype
ENSG00000125247 (TMTC4)
transmembrane and tetratricopeptide repeat containing 4 		ENST00000328767 (TMTC4-009) 100604871-100674774 protein_coding
ENST00000342624 (TMTC4-001) 100603934-100674795 protein_coding
ENST00000376234 (TMTC4-004) 100603927-100674879 protein_coding
ENST00000423847 (TMTC4-008) 100668579-100674879 protein_coding
ENST00000440120 (TMTC4-012) 100663120-100674795 nonsense_mediated_decay
ENST00000462211 (TMTC4-003) 100625453-100642311 processed_transcript
ENST00000475272 (TMTC4-011) 100668579-100675093 protein_coding
ENST00000478272 (TMTC4-007) 100625535-100636608 processed_transcript
ENST00000480433 (TMTC4-005) 100668362-100670735 retained_intron
ENST00000489713 (TMTC4-010) 100624910-100638808 retained_intron
ENST00000496511 (TMTC4-006) 100635065-100636632 processed_transcript
ENSG00000134864 (GGACT)
gamma-glutamylamine cyclotransferase 		ENST00000376250 (GGACT-001) 100530183-100583997 protein_coding
ENST00000455100 (GGACT-201) 100530164-100533802 protein_coding
ENST00000464500 (GGACT-005) 100532514-100533653 protein_coding
ENST00000467518 (GGACT-004) 100532495-100533669 protein_coding
ENST00000471912 (GGACT-002) 100532514-100588731 protein_coding
ENST00000492399 (GGACT-003) 100532495-100589528 protein_coding
ENSG00000175198 (PCCA)
propionyl CoA carboxylase, alpha polypeptide 		ENST00000376279 (PCCA-201) 100089015-100530432 protein_coding
ENST00000376285 (PCCA-001) 100089083-100530435 protein_coding
ENST00000376286 (PCCA-202) 100089015-100530432 protein_coding
ENST00000413170 (PCCA-005) 100368499-100491817 protein_coding
ENST00000424527 (PCCA-003) 100293224-100425731 protein_coding
ENST00000428969 (PCCA-007) 100515427-100530432 protein_coding
ENST00000443601 (PCCA-002) 100305776-100340259 protein_coding
ENST00000458283 (PCCA-004) 100368472-100530432 protein_coding
ENST00000485946 (PCCA-006) 100149201-100161625 processed_transcript
ENST00000621936 (PCCA-008) 100489968-100491817 retained_intron
ENSG00000224356 (RP11-151A6.4)
 ENST00000454752 (RP11-151A6.4-001) 100535741-100580117 sense_intronic
ENST00000608779 (RP11-151A6.4-002) 100537610-100539806 sense_intronic
ENSG00000234354 (RPS26P47)
ribosomal protein S26 pseudogene 47 		ENST00000427219 (RPS26P47-001) 100539901-100540248 processed_pseudogene
ENSG00000237082 (COX5BP6)
cytochrome c oxidase subunit Vb pseudogene 6 		ENST00000454311 (COX5BP6-001) 100623875-100624429 processed_pseudogene
ENSG00000280169 (RP11-151A6.6)
 ENST00000624456 (RP11-151A6.6-001) 100537365-100539567 TEC
CIL_0005NV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041625-ENSMUSG00000041594 CGP 10090 14:122816223-122984035
GeneTranscriptPositionBiotype
ENSMUSG00000041594 (Tmtc4)
transmembrane and tetratricopeptide repeat containing 4 		ENSMUST00000037726 (Tmtc4-001) 122918971-122983283 protein_coding
ENSMUST00000125900 (Tmtc4-008) 122924806-122929133 retained_intron
ENSMUST00000126494 (Tmtc4-007) 122919906-122936031 processed_transcript
ENSMUST00000126867 (Tmtc4-005) 122919731-122983142 protein_coding
ENSMUST00000128969 (Tmtc4-006) 122944747-122983275 nonsense_mediated_decay
ENSMUST00000135917 (Tmtc4-002) 122932485-122983240 retained_intron
ENSMUST00000141478 (Tmtc4-009) 122978126-122984035 processed_transcript
ENSMUST00000143189 (Tmtc4-003) 122918978-122983217 nonsense_mediated_decay
ENSMUST00000148661 (Tmtc4-004) 122919760-122983142 protein_coding
ENSMUST00000153496 (Tmtc4-010) 122973170-122983169 processed_transcript
ENSMUSG00000041625 (Ggact)
gamma-glutamylamine cyclotransferase 		ENSMUST00000038075 (Ggact-001) 122890860-122913162 protein_coding
ENSMUST00000110679 (Ggact-002) 122816223-122913120 protein_coding
ENSMUST00000160401 (Ggact-004) 122891437-122913757 protein_coding
ENSMUST00000161322 (Ggact-005) 122890871-122891707 protein_coding
ENSMUST00000162164 (Ggact-003) 122891486-122913085 protein_coding
ENSMUSG00000041650 (Pcca)
propionyl-Coenzyme A carboxylase, alpha polypeptide 		ENSMUST00000038374 (Pcca-001) 122534339-122889944 protein_coding
ENSMUST00000128893 (Pcca-010) 122737900-122813593 retained_intron
ENSMUST00000132444 (Pcca-011) 122790399-122889820 protein_coding
ENSMUST00000135578 (Pcca-008) 122534345-122650284 protein_coding
ENSMUST00000138836 (Pcca-012) 122886903-122889828 retained_intron
ENSMUST00000140517 (Pcca-002) 122875935-122891100 processed_transcript
ENSMUST00000143240 (Pcca-007) 122602919-122664327 processed_transcript
ENSMUST00000147018 (Pcca-004) 122714029-122737995 nonsense_mediated_decay
ENSMUST00000148172 (Pcca-006) 122534324-122582977 retained_intron
ENSMUST00000152383 (Pcca-003) 122714055-122889825 nonsense_mediated_decay
ENSMUST00000154206 (Pcca-005) 122534331-122616809 protein_coding
ENSMUST00000156755 (Pcca-009) 122714119-122813247 processed_transcript
ENSMUST00000177312 (Pcca-013) 122582684-122889828 nonsense_mediated_decay
ENSMUSG00000085423 (Gm15735)
predicted gene 15735 		ENSMUST00000136187 (Gm15735-001) 122952119-122956343 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005NV_0001ENSG00000125247ENST00000328767ENST00000342624ENST00000376234ENST00000423847ENST00000440120ENST00000462211ENST00000475272ENST00000478272ENST00000480433ENST00000489713ENST00000496511ENSG00000134864ENST00000376250ENST00000455100ENST00000464500ENST00000467518ENST00000471912ENST00000492399ENSG00000175198ENST00000376279ENST00000376285ENST00000376286ENST00000413170ENST00000424527ENST00000428969ENST00000443601ENST00000458283ENST00000485946ENST00000621936ENSG00000224356ENST00000454752ENST00000608779ENSG00000234354ENST00000427219ENSG00000237082ENST00000454311ENSG00000280169ENST00000624456CIL_0005NV_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005NV_0001ENSG00000125247ENST00000328767ENST00000342624ENST00000376234ENST00000440120ENST00000462211ENST00000489713ENSG00000134864ENST00000376250ENST00000455100ENSG00000175198ENST00000376279ENST00000376285ENST00000376286ENST00000443601ENST00000621936ENSG00000224356ENST00000454752ENST00000608779ENSG00000234354ENST00000427219ENSG00000237082ENST00000454311ENSG00000280169ENST00000624456CIL_0005NV_0002ENSMUSG00000041594ENSMUST00000037726ENSMUST00000126494ENSMUST00000135917ENSMUSG00000041625ENSMUST00000038075ENSMUST00000160401ENSMUST00000162164ENSMUSG00000041650ENSMUST00000038374ENSMUST00000135578ENSMUSG00000085423ENSMUST00000136187
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000125247 ENST00000328767 0.769±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.369±0.00 N/A 1.898±0.00 N/A N/A
ENST00000342624 1.472±0.00 1.790±0.00 N/A N/A 0.949±0.00 0.344±0.06 0.900±0.00 3.727±0.00 1.124±0.00 0.691±0.05 N/A 3.176±2.20 1.569±1.40 3.372±0.74
ENST00000376234 N/A 0.818±0.00 N/A 5.947±0.81 1.164±0.37 1.077±0.42 0.355±0.00 1.392±0.19 1.121±0.32 0.377±0.00 1.256±0.31 1.657±1.56 1.100±0.43 2.004±0.77
ENST00000423847 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440120 N/A N/A 2.575±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462211 N/A N/A N/A N/A N/A N/A 0.541±0.00 N/A N/A N/A 0.852±0.00 N/A 0.648±0.00 3.406±0.00
ENST00000475272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489713 N/A N/A N/A 1.433±0.00 N/A N/A N/A 0.487±0.00 N/A 0.212±0.00 N/A 0.747±0.00 N/A N/A
ENST00000496511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000134864 ENST00000376250 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.029±0.00 N/A N/A
ENST00000455100 1.452±0.00 2.373±0.00 5.861±0.00 2.233±0.00 1.850±0.95 3.041±0.00 1.579±0.00 8.992±0.00 5.817±0.00 0.849±0.05 0.691±0.00 N/A 2.380±0.00 3.494±0.00
ENST00000464500 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000175198 ENST00000376279 N/A N/A N/A 3.546±0.00 N/A N/A N/A 5.505±0.00 N/A N/A N/A 2.389±0.00 N/A 1.620±0.00
ENST00000376285 4.238±0.00 1.991±0.00 8.597±0.00 6.466±0.00 2.055±0.15 5.397±3.30 3.419±1.09 8.138±3.15 3.659±1.66 2.196±0.00 1.629±0.37 5.835±3.94 3.928±2.25 2.299±0.03
ENST00000376286 N/A 3.069±0.00 N/A 1.303±0.00 N/A 4.496±0.00 N/A 11.246±0.00 8.269±0.00 1.536±0.30 1.782±0.00 1.600±0.37 0.618±0.00 2.971±0.00
ENST00000413170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000428969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443601 N/A N/A N/A N/A 7.946±0.00 N/A N/A N/A N/A N/A N/A 14.965±0.00 N/A N/A
ENST00000458283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621936 N/A N/A N/A N/A 1.325±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000224356 ENST00000454752 N/A 0.158±0.00 0.082±0.00 0.073±0.00 0.126±0.11 0.048±0.00 0.014±0.00 0.060±0.02 N/A N/A N/A 0.064±0.05 0.020±0.00 0.374±0.02
ENST00000608779 N/A N/A N/A N/A 0.252±0.00 0.256±0.00 0.049±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000234354 ENST00000427219 N/A 0.194±0.00 N/A N/A 0.203±0.00 N/A N/A 0.068±0.00 N/A 0.064±0.00 0.114±0.00 0.345±0.05 0.182±0.00 0.155±0.02
ENSG00000237082 ENST00000454311 0.242±0.00 0.595±0.00 N/A 0.787±0.00 0.616±0.00 N/A 0.321±0.00 0.689±0.00 N/A N/A N/A 0.851±0.29 0.279±0.00 0.357±0.05
ENSG00000280169 ENST00000624456 0.024±0.00 0.097±0.00 0.208±0.00 0.058±0.03 0.066±0.03 0.349±0.00 0.031±0.03 0.031±0.00 0.023±0.00 0.202±0.00 N/A 0.158±0.12 0.054±0.00 0.768±0.60
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000041594 ENSMUST00000037726 5.991±0.17 N/A 4.678±0.12 12.604±3.36 3.418±0.30 5.680±0.39 N/A N/A N/A 3.405±0.17 N/A 6.550±1.97 2.622±1.57 N/A
ENSMUST00000125900 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126494 N/A N/A N/A 14.151±0.00 N/A N/A N/A N/A N/A N/A N/A 13.810±0.00 2.577±0.00 N/A
ENSMUST00000126867 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.393±0.73 N/A N/A
ENSMUST00000141478 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148661 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153496 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000041625 ENSMUST00000038075 18.870±1.22 23.823±3.98 20.139±0.19 8.583±0.00 16.793±1.75 64.544±3.42 14.543±1.75 103.125±9.45 59.500±38.93 21.515±0.95 8.748±0.60 23.868±2.30 11.814±0.71 19.567±2.49
ENSMUST00000110679 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160401 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 22.234±0.65
ENSMUST00000161322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162164 N/A N/A N/A N/A N/A N/A N/A N/A 26.690±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000041650 ENSMUST00000038374 20.758±2.02 19.746±1.40 6.164±0.65 8.779±2.78 25.185±11.37 11.016±1.52 11.495±6.25 35.986±9.39 21.212±9.73 8.912±1.25 13.561±3.41 13.631±4.09 4.748±2.96 10.151±2.20
ENSMUST00000128893 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 33.403±0.00 18.909±13.22 N/A
ENSMUST00000138836 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143240 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154206 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156755 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085423 ENSMUST00000136187 N/A 0.231±0.09 0.127±0.06 0.228±0.04 0.133±0.00 N/A 0.223±0.00 0.300±0.19 0.119±0.06 0.136±0.05 0.140±0.00 0.352±0.20 0.184±0.00 0.077±0.01

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