C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004G2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000037178-ENSDARG00000028982 CGP 7955 1:28776999-28898986
GeneTranscriptPositionBiotype
ENSDARG00000028982 (pcca)
propionyl-Coenzyme A carboxylase, alpha polypeptide 		ENSDART00000133905 (pcca-001) 28807314-28898986 protein_coding
ENSDART00000135252 (pcca-003) 28807373-28821884 protein_coding
ENSDART00000136786 (pcca-002) 28807322-28821264 protein_coding
ENSDARG00000037178 (zic2b)
zic family member 2 (odd-paired homolog, Drosophila) b 		ENSDART00000054066 (zic2b-001) 28803272-28806135 protein_coding
ENSDART00000142184 (zic2b-002) 28776999-28805613 processed_transcript
CIL_0004G2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000043355-ENSG00000175198 CGP 9606 13:99981772-100530435
GeneTranscriptPositionBiotype
ENSG00000043355 (ZIC2)
Zic family member 2 		ENST00000376335 (ZIC2-001) 99981772-99986773 protein_coding
ENST00000468291 (ZIC2-004) 99984689-99985492 processed_transcript
ENST00000477213 (ZIC2-005) 99984789-99985474 processed_transcript
ENST00000481565 (ZIC2-003) 99985494-99985904 processed_transcript
ENST00000490085 (ZIC2-002) 99984289-99985492 processed_transcript
ENST00000620342 (ZIC2-201) 99982065-99985682 protein_coding
ENSG00000134864 (GGACT)
gamma-glutamylamine cyclotransferase 		ENST00000376250 (GGACT-001) 100530183-100583997 protein_coding
ENST00000455100 (GGACT-201) 100530164-100533802 protein_coding
ENST00000464500 (GGACT-005) 100532514-100533653 protein_coding
ENST00000467518 (GGACT-004) 100532495-100533669 protein_coding
ENST00000471912 (GGACT-002) 100532514-100588731 protein_coding
ENST00000492399 (GGACT-003) 100532495-100589528 protein_coding
ENSG00000175198 (PCCA)
propionyl CoA carboxylase, alpha polypeptide 		ENST00000376279 (PCCA-201) 100089015-100530432 protein_coding
ENST00000376285 (PCCA-001) 100089083-100530435 protein_coding
ENST00000376286 (PCCA-202) 100089015-100530432 protein_coding
ENST00000413170 (PCCA-005) 100368499-100491817 protein_coding
ENST00000424527 (PCCA-003) 100293224-100425731 protein_coding
ENST00000428969 (PCCA-007) 100515427-100530432 protein_coding
ENST00000443601 (PCCA-002) 100305776-100340259 protein_coding
ENST00000458283 (PCCA-004) 100368472-100530432 protein_coding
ENST00000485946 (PCCA-006) 100149201-100161625 processed_transcript
ENST00000621936 (PCCA-008) 100489968-100491817 retained_intron
ENSG00000225999 (NDUFA12P1)
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 pseudogene 1 		ENST00000455914 (NDUFA12P1-001) 100027769-100028174 processed_pseudogene
ENSG00000228501 (RPL15P18)
ribosomal protein L15 pseudogene 18 		ENST00000432924 (RPL15P18-001) 100150481-100151092 processed_pseudogene
ENSG00000236554 (ASNSP3)
asparagine synthetase pseudogene 3 		ENST00000451989 (ASNSP3-001) 100062296-100063601 processed_pseudogene
ENSG00000260738 (LINC00554)
long intergenic non-protein coding RNA 554 		ENST00000564841 (LINC00554-001) 99994899-99997909 antisense
ENSG00000270632 (RP11-340C20.3)
 ENST00000603008 (RP11-340C20.3-001) 100198187-100198469 processed_pseudogene
ENSG00000274605 (RP11-12G12.7)
 ENST00000612598 (RP11-12G12.7-001) 100086031-100088848 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004G2_0001ENSDARG00000028982ENSDART00000133905ENSDART00000135252ENSDART00000136786ENSDARG00000037178ENSDART00000054066ENSDART00000142184CIL_0004G2_0002ENSG00000043355ENST00000376335ENST00000468291ENST00000477213ENST00000481565ENST00000490085ENST00000620342ENSG00000134864ENST00000376250ENST00000455100ENST00000464500ENST00000467518ENST00000471912ENST00000492399ENSG00000175198ENST00000376279ENST00000376285ENST00000376286ENST00000413170ENST00000424527ENST00000428969ENST00000443601ENST00000458283ENST00000485946ENST00000621936ENSG00000225999ENST00000455914ENSG00000228501ENST00000432924ENSG00000236554ENST00000451989ENSG00000260738ENST00000564841ENSG00000270632ENST00000603008ENSG00000274605ENST00000612598
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004G2_0001ENSDARG00000028982ENSDART00000133905ENSDARG00000037178ENSDART00000054066ENSDART00000142184CIL_0004G2_0002ENSG00000043355ENST00000376335ENST00000468291ENST00000620342ENSG00000134864ENST00000376250ENST00000455100ENSG00000175198ENST00000376279ENST00000376285ENST00000376286ENST00000443601ENST00000621936ENSG00000225999ENST00000455914ENSG00000228501ENST00000432924ENSG00000236554ENST00000451989ENSG00000260738ENST00000564841ENSG00000270632ENST00000603008ENSG00000274605ENST00000612598
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000028982 ENSDART00000133905 N/A N/A N/A 6.624±2.95 N/A N/A 32.943±10.38 9.747±5.16 1.885±0.00 N/A 7.487±0.00 N/A N/A N/A
ENSDART00000135252 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000136786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000037178 ENSDART00000054066 N/A N/A N/A 2.571±0.99 N/A N/A 0.026±0.00 0.040±0.01 0.020±0.00 N/A 0.123±0.00 N/A N/A N/A
ENSDART00000142184 N/A N/A N/A N/A N/A N/A 3.184±0.00 3.109±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000043355 ENST00000376335 0.007±0.00 0.104±0.00 N/A 1.712±1.25 N/A N/A N/A 0.015±0.00 N/A N/A N/A 0.326±0.18 0.100±0.05 0.743±0.00
ENST00000468291 N/A N/A N/A N/A 0.313±0.00 N/A N/A 0.288±0.00 N/A N/A N/A N/A N/A N/A
ENST00000477213 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620342 N/A 0.208±0.00 N/A N/A N/A N/A N/A N/A N/A 0.022±0.00 N/A 0.035±0.00 N/A 0.405±0.00
ENSG00000134864 ENST00000376250 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.029±0.00 N/A N/A
ENST00000455100 1.452±0.00 2.373±0.00 5.861±0.00 2.233±0.00 1.850±0.95 3.041±0.00 1.579±0.00 8.992±0.00 5.817±0.00 0.849±0.05 0.691±0.00 N/A 2.380±0.00 3.494±0.00
ENST00000464500 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000175198 ENST00000376279 N/A N/A N/A 3.546±0.00 N/A N/A N/A 5.505±0.00 N/A N/A N/A 2.389±0.00 N/A 1.620±0.00
ENST00000376285 4.238±0.00 1.991±0.00 8.597±0.00 6.466±0.00 2.055±0.15 5.397±3.30 3.419±1.09 8.138±3.15 3.659±1.66 2.196±0.00 1.629±0.37 5.835±3.94 3.928±2.25 2.299±0.03
ENST00000376286 N/A 3.069±0.00 N/A 1.303±0.00 N/A 4.496±0.00 N/A 11.246±0.00 8.269±0.00 1.536±0.30 1.782±0.00 1.600±0.37 0.618±0.00 2.971±0.00
ENST00000413170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000428969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443601 N/A N/A N/A N/A 7.946±0.00 N/A N/A N/A N/A N/A N/A 14.965±0.00 N/A N/A
ENST00000458283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621936 N/A N/A N/A N/A 1.325±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000225999 ENST00000455914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.048±0.02
ENSG00000228501 ENST00000432924 0.183±0.00 0.222±0.00 0.137±0.00 0.106±0.00 0.164±0.00 0.161±0.04 N/A 0.162±0.03 0.113±0.00 0.089±0.00 0.275±0.00 0.103±0.03 N/A 0.322±0.00
ENSG00000236554 ENST00000451989 N/A N/A N/A 0.074±0.00 0.016±0.00 0.118±0.00 0.038±0.00 N/A 0.035±0.00 N/A N/A 0.027±0.01 N/A 0.121±0.08
ENSG00000260738 ENST00000564841 N/A 0.016±0.00 N/A N/A N/A 0.004±0.00 N/A 0.004±0.00 0.114±0.00 0.007±0.00 N/A N/A N/A 0.091±0.03
ENSG00000270632 ENST00000603008 N/A N/A N/A N/A 1.420±0.00 0.634±0.00 N/A N/A N/A N/A 8.994±0.00 N/A N/A N/A
ENSG00000274605 ENST00000612598 1.311±0.00 1.387±0.00 N/A 0.453±0.07 0.870±0.64 1.321±0.19 1.071±0.61 2.521±2.20 4.213±3.83 0.404±0.18 0.448±0.35 1.775±0.45 0.547±0.17 1.041±0.73

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