C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: TSEN2 tRNA splicing endonuclease subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000455118 TSEN2-007 ENSG00000154743 9606 + 3:12529779-12539288 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalMuscleENST00000455118
Transcript ID Adrenal Muscle
ENST00000455118 2.746±0.00 0.744±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004K9 CIL_0004K9_0001 CGP 3:12287368-12539623
CIL_0005SH CIL_0005SH_0001 CGP 3:12484432-12561059

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000213 IEA tRNA-intron endonuclease activity
GO:0006388 IEA tRNA splicing, via endonucleolytic cleavage and ligation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.000001 58

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