C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005SH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000154743-ENSG00000225526 CGP 9606 3:12484432-12561059
GeneTranscriptPositionBiotype
ENSG00000075975 (MKRN2)
makorin ring finger protein 2 		ENST00000170447 (MKRN2-001) 12557014-12583713 protein_coding
ENST00000411987 (MKRN2-002) 12557087-12582503 protein_coding
ENST00000448482 (MKRN2-003) 12557090-12582626 protein_coding
ENSG00000154743 (TSEN2)
TSEN2 tRNA splicing endonuclease subunit 		ENST00000284995 (TSEN2-001) 12484511-12533317 protein_coding
ENST00000402228 (TSEN2-002) 12484491-12533317 protein_coding
ENST00000412698 (TSEN2-008) 12529871-12539620 protein_coding
ENST00000415684 (TSEN2-006) 12489780-12533659 protein_coding
ENST00000444864 (TSEN2-201) 12484511-12531013 protein_coding
ENST00000446004 (TSEN2-004) 12484432-12528924 protein_coding
ENST00000454502 (TSEN2-003) 12484443-12533317 protein_coding
ENST00000455118 (TSEN2-007) 12529779-12539288 nonsense_mediated_decay
ENST00000473755 (TSEN2-005) 12484511-12539623 retained_intron
ENST00000475595 (TSEN2-009) 12530848-12533307 processed_transcript
ENST00000490981 (TSEN2-010) 12503446-12505574 retained_intron
ENSG00000200114 (RNA5SP123)
RNA, 5S ribosomal pseudogene 123 		ENST00000363244 (RNA5SP123-201) 12511095-12511213 rRNA
ENSG00000251774 (RNU6-377P)
RNA, U6 small nuclear 377, pseudogene 		ENST00000515965 (RNU6-377P-201) 12514706-12514807 snRNA
CIL_0005SH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042389-ENSMUSG00000068011 CGP 10090 6:115544664-115592576
GeneTranscriptPositionBiotype
ENSMUSG00000042389 (Tsen2)
tRNA splicing endonuclease 2 homolog (S. cerevisiae) 		ENSMUST00000040234 (Tsen2-001) 115544664-115578350 protein_coding
ENSMUST00000123359 (Tsen2-003) 115544702-115559742 processed_transcript
ENSMUST00000130425 (Tsen2-004) 115544664-115554272 retained_intron
ENSMUST00000138200 (Tsen2-002) 115544706-115552361 retained_intron
ENSMUST00000143520 (Tsen2-005) 115574448-115577991 processed_transcript
ENSMUSG00000068011 (2510049J12Rik)
makorin, ring finger protein 2, opposite strand 		ENSMUST00000088962 (2510049J12Rik-001) 115583544-115592549 nonsense_mediated_decay
ENSMUST00000112957 (2510049J12Rik-002) 115585122-115592576 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005SH_0001ENSG00000075975ENST00000170447ENST00000411987ENST00000448482ENSG00000154743ENST00000284995ENST00000402228ENST00000412698ENST00000415684ENST00000444864ENST00000446004ENST00000454502ENST00000455118ENST00000473755ENST00000475595ENST00000490981ENSG00000200114ENST00000363244ENSG00000251774ENST00000515965CIL_0005SH_0002ENSMUSG00000042389ENSMUST00000040234ENSMUST00000123359ENSMUST00000130425ENSMUST00000138200ENSMUST00000143520ENSMUSG00000068011ENSMUST00000088962ENSMUST00000112957
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005SH_0001ENSG00000075975ENST00000170447ENST00000411987ENSG00000154743ENST00000284995ENST00000402228ENST00000412698ENST00000415684ENST00000444864ENST00000446004ENST00000454502ENST00000455118ENST00000473755ENST00000475595ENSG00000200114ENST00000363244ENSG00000251774ENST00000515965CIL_0005SH_0002ENSMUSG00000042389ENSMUST00000040234ENSMUST00000123359ENSMUST00000138200ENSMUST00000143520ENSMUSG00000068011ENSMUST00000088962ENSMUST00000112957
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000075975 ENST00000170447 7.601±0.00 11.523±0.00 2.495±0.00 6.007±3.57 4.483±0.00 6.963±0.00 5.008±2.81 4.431±2.98 3.581±0.04 5.627±1.05 6.097±0.00 9.313±2.71 7.244±1.91 13.500±1.51
ENST00000411987 N/A N/A N/A N/A N/A 6.838±0.00 N/A 3.123±0.00 N/A 6.803±0.00 N/A 4.543±0.00 N/A 28.237±3.14
ENST00000448482 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000154743 ENST00000284995 N/A N/A N/A N/A 0.659±0.00 N/A N/A N/A 1.091±0.57 N/A 1.068±0.00 1.137±0.00 0.472±0.00 1.365±0.57
ENST00000402228 0.774±0.00 N/A 0.295±0.00 0.817±0.24 N/A N/A 0.352±0.00 0.800±0.00 N/A N/A N/A 2.208±0.57 N/A N/A
ENST00000412698 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.509±0.00 2.555±1.16 N/A N/A N/A
ENST00000415684 N/A 1.252±0.00 N/A 0.610±0.00 0.823±0.00 1.500±0.00 N/A 0.731±0.43 N/A 0.245±0.13 N/A 1.350±0.10 0.733±0.04 0.942±0.00
ENST00000444864 N/A N/A 0.483±0.00 N/A N/A 0.731±0.00 0.387±0.00 N/A N/A N/A N/A 2.304±0.54 N/A 0.855±0.00
ENST00000446004 N/A N/A N/A N/A 1.696±0.00 1.800±0.00 1.635±0.00 N/A N/A 0.758±0.00 1.730±0.14 3.414±0.00 1.060±0.00 2.481±0.53
ENST00000454502 N/A N/A N/A 0.555±0.00 N/A N/A N/A N/A N/A N/A N/A 2.737±1.23 N/A N/A
ENST00000455118 N/A 2.746±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.744±0.00 N/A N/A N/A
ENST00000473755 N/A N/A N/A N/A N/A N/A N/A N/A 0.473±0.32 0.640±0.00 N/A 1.968±0.00 N/A N/A
ENST00000475595 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.422±0.00 N/A N/A N/A N/A
ENST00000490981 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000200114 ENST00000363244 N/A 0.199±0.00 N/A 0.624±0.00 N/A N/A N/A N/A N/A N/A N/A 1.322±0.00 N/A N/A
ENSG00000251774 ENST00000515965 0.366±0.00 N/A N/A 0.184±0.00 0.360±0.00 N/A N/A 0.359±0.00 N/A N/A N/A 56.184±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042389 ENSMUST00000040234 3.809±0.34 1.247±0.67 4.186±0.32 5.620±2.02 1.486±0.37 0.891±0.32 1.558±0.37 2.304±0.29 3.002±1.34 1.515±0.48 2.869±0.33 2.570±1.26 3.935±2.05 0.384±0.12
ENSMUST00000123359 N/A N/A N/A 2.750±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.697±0.34
ENSMUST00000130425 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138200 0.280±0.00 0.200±0.00 N/A 0.123±0.00 0.096±0.00 N/A N/A 0.125±0.01 N/A N/A N/A 0.870±0.02 N/A 0.033±0.02
ENSMUST00000143520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.603±0.00
ENSMUSG00000068011 ENSMUST00000088962 0.101±0.07 0.127±0.07 N/A 0.324±0.02 0.110±0.06 2.521±0.99 0.255±0.02 1.101±0.16 1.560±0.73 0.102±0.04 0.128±0.09 0.317±0.18 0.276±0.30 0.084±0.05
ENSMUST00000112957 N/A 0.115±0.05 N/A N/A 0.053±0.00 20.001±5.59 0.649±0.09 5.463±1.91 8.764±3.50 0.144±0.09 0.102±0.00 0.721±0.44 2.848±3.04 0.552±0.24

Loading