C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 39 (zinc transporter), member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000455372 SLC39A3-001 ENSG00000141873 9606 - 19:2734524-2740028 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonKidneyLungOvaryPlacentaENST00000455372
Transcript ID Adipose Adrenal Bladder Breast Colon Kidney Lung Ovary Placenta
ENST00000455372 0.707±0.00 2.393±0.00 0.089±0.00 1.117±0.87 0.640±0.00 1.894±0.00 0.249±0.04 0.677±0.00 1.358±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001RR CIL_0001RR_0001 CGP 19:2732204-2783371

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 TAS plasma membrane
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030001 IEA metal ion transport
GO:0046873 IEA metal ion transmembrane transporter activity
GO:0055085 TAS:IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168076 Slc39a3-201 protein_coding Mus_musculus 1.4013e-45 189
ENSMUST00000059551 Slc39a3-002 protein_coding Mus_musculus 1.4013e-45 189
ENSMUST00000117276 Slc39a3-001 protein_coding Mus_musculus 1.4013e-45 189

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