C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 2, regulatory subunit B, delta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000455566 PPP2R2D-001 ENSG00000175470 9606 + 10:131900644-131959834 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LungOvaryENST00000455566
Transcript ID Lung Ovary
ENST00000455566 0.798±0.00 1.869±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000478 CIL_000478_0002 CGP 10:131900644-131981931

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000159 ISS:IEA protein phosphatase type 2A complex
GO:0000278 TAS mitotic cell cycle
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0007067 ISS mitotic nuclear division
GO:0007165 IEA signal transduction
GO:0008601 ISS:IEA protein phosphatase type 2A regulator activity
GO:0010458 ISS exit from mitosis
GO:0050790 IEA regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041097 Ppp2r2d-001 protein_coding Mus_musculus 0 1927
ENSMUST00000155672 Ppp2r2d-003 protein_coding Mus_musculus 0 1825
ENSMUST00000174090 Ppp2r2d-008 protein_coding Mus_musculus 0 970
ENSMUST00000136824 Ppp2r2d-007 nonsense_mediated_decay Mus_musculus 0 752
ENSDART00000155816 PPP2R2A (2 of 2)-001 protein_coding Danio_rerio 0 553
ENSMUST00000172764 Ppp2r2d-009 nonsense_mediated_decay Mus_musculus 0 544
ENSDART00000028983 PPP2R2A (2 of 2)-201 protein_coding Danio_rerio 0 544
ENSMUST00000128157 Ppp2r2d-002 retained_intron Mus_musculus 0 448
ENSMUST00000152104 Ppp2r2d-005 processed_transcript Mus_musculus 0 329
ENSMUST00000140047 Ppp2r2d-006 processed_transcript Mus_musculus 0 298
ENSMUST00000148453 Ppp2r2d-004 nonsense_mediated_decay Mus_musculus 0 267

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