C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein phosphatase 2, regulatory subunit B, delta
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000175470 PPP2R2D 9606 + 10:131900644-131959834 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000422256 PPP2R2D-201 131900644-131956547 protein_coding
  ENST00000455566 PPP2R2D-001 131900644-131959834 protein_coding
  ENST00000470416 PPP2R2D-007 131901291-131959827 nonsense_mediated_decay
  ENST00000472664 PPP2R2D-004 131940607-131945925 retained_intron
  ENST00000482010 PPP2R2D-005 131901266-131956555 nonsense_mediated_decay
  ENST00000490777 PPP2R2D-003 131940159-131956242 retained_intron
  ENST00000517472 PPP2R2D-006 131939776-131944006 retained_intron
  ENST00000616467 PPP2R2D-002 131901031-131956555 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000422256ENST00000455566ENST00000470416ENST00000482010ENST00000490777ENST00000616467
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000422256 3.582±0.00 4.205±0.00 0.777±0.00 4.956±1.42 4.789±0.00 2.724±1.62 4.675±3.02 4.058±3.20 2.248±0.11 1.788±0.77 5.083±2.18 7.191±5.72 6.153±2.16 4.171±2.22
ENST00000455566 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.798±0.00 N/A 1.869±0.00 N/A N/A
ENST00000470416 0.413±0.00 0.765±0.00 N/A 0.800±0.00 0.364±0.00 N/A 0.563±0.00 N/A 0.201±0.00 N/A N/A N/A N/A N/A
ENST00000482010 2.280±0.00 2.090±0.00 1.217±0.00 3.076±0.00 2.919±0.00 N/A N/A 2.194±0.20 1.175±0.00 5.081±0.00 8.792±0.00 3.707±0.41 1.985±0.58 3.552±1.61
ENST00000490777 1.988±0.00 2.574±0.00 N/A 4.762±0.00 4.237±0.00 5.131±0.00 2.663±0.00 3.403±1.93 1.853±0.00 4.000±0.00 N/A 8.909±2.57 6.260±1.59 6.800±1.68
ENST00000616467 1.401±0.00 1.466±0.00 N/A 4.559±0.00 1.583±0.29 2.620±1.40 3.183±0.00 1.774±0.39 1.144±0.00 N/A 0.929±0.00 2.265±0.00 2.607±0.16 3.640±0.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000478 CIL_000478_0002 CGP 10:131900644-131981931

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000159 IEA protein phosphatase type 2A complex
GO:0000278 TAS mitotic cell cycle
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0007067 ISS mitotic nuclear division
GO:0007165 IEA signal transduction
GO:0008601 IEA protein phosphatase type 2A regulator activity
GO:0010458 ISS exit from mitosis
GO:0050790 IEA regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078044 ppp2r2d protein phosphatase 2, regulatory subunit B, delta protein_coding Danio_rerio
ENSMUSG00000041769 Ppp2r2d protein phosphatase 2, regulatory subunit B, delta protein_coding Mus_musculus

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