C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transport and golgi organization 2 homolog (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000456048 TANGO2-205 ENSG00000183597 9606 + 22:20021069-20065925 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonHeartLungOvaryPlacentaTestisENST00000456048
Transcript ID Adrenal Colon Heart Lung Ovary Placenta Testis
ENST00000456048 2.463±0.00 1.508±0.00 0.439±0.00 2.711±0.00 2.160±0.00 1.471±0.13 2.550±0.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BW CIL_0008BW_0001 VISTA 22:19453681-20054184
CIL_00099J CIL_00099J_0001 VISTA 22:19461833-20062532
CIL_00095F CIL_00095F_0001 VISTA 22:19497462-20100487
CIL_0006HK CIL_0006HK_0002 CGP 22:19969896-20065926

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000183630 TANGO2-001 protein_coding Mus_musculus 1e-35 156
ENSMUST00000115628 Tango2-001 protein_coding Mus_musculus 1e-35 156
ENSMUST00000183496 TANGO2-003 retained_intron Mus_musculus 6e-24 117
ENSMUST00000134385 Tango2-003 retained_intron Mus_musculus 6e-24 117
ENSMUST00000185024 TANGO2-005 retained_intron Mus_musculus 3e-22 111
ENSMUST00000184698 TANGO2-006 retained_intron Mus_musculus 3e-22 111
ENSMUST00000184631 TANGO2-010 protein_coding Mus_musculus 3e-22 111
ENSMUST00000184324 TANGO2-004 nonsense_mediated_decay Mus_musculus 3e-22 111
ENSMUST00000150152 Tango2-005 retained_intron Mus_musculus 3e-22 111
ENSMUST00000145203 Tango2-006 retained_intron Mus_musculus 3e-22 111
ENSMUST00000130752 Tango2-010 protein_coding Mus_musculus 3e-22 111
ENSMUST00000125287 Tango2-004 nonsense_mediated_decay Mus_musculus 3e-22 111
ENSMUST00000184457 TANGO2-002 nonsense_mediated_decay Mus_musculus 9e-22 110
ENSMUST00000128580 Tango2-002 nonsense_mediated_decay Mus_musculus 9e-22 110

Loading