C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | synaptojanin 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000456084  |
SYNJ1-006 |
ENSG00000159082 |
9606 | - |
21:32695226-32726942  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008TI | CIL_0008TI_0001 | VISTA | 21:32549146-33151638 |
| CIL_00087M | CIL_00087M_0001 | VISTA | 21:32616647-33220574 |
| CIL_0009BQ | CIL_0009BQ_0001 | VISTA | 21:32618474-33219807 |
| CIL_000089 | CIL_000089_0001 | CGP | 21:32628759-32771858 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0042578 | IEA | phosphoric ester hydrolase activity |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000118390
|
Synj1-003 | protein_coding | Mus_musculus | 0 | 725 |
|
ENSMUST00000121759
|
Synj1-002 | protein_coding | Mus_musculus | 0 | 725 |
|
ENSMUST00000170853
|
Synj1-201 | protein_coding | Mus_musculus | 0 | 723 |
|
ENSMUST00000130813
|
Synj1-010 | protein_coding | Mus_musculus | 0 | 723 |
|
ENSMUST00000118246
|
Synj1-001 | retained_intron | Mus_musculus | 0 | 723 |
|
ENSMUST00000156140
|
Synj1-004 | retained_intron | Mus_musculus | 0 | 233 |
