| Transcript ID | Brain | Liver | Ovary |
|---|---|---|---|
| ENSMUST00000170853 | 14.425±0.00 | 0.611±0.00 | 1.087±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | synaptojanin 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000170853  |
Synj1-201 |
ENSMUSG00000022973 |
10090 | - |
16:90936101-91011095  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008TI | CIL_0008TI_0002 | VISTA | 16:90804484-91407069 |
| CIL_00087M | CIL_00087M_0002 | VISTA | 16:90839145-91442270 |
| CIL_0009BQ | CIL_0009BQ_0002 | VISTA | 16:90840152-91441411 |
| CIL_000089 | CIL_000089_0002 | CGP | 16:90936092-91044543 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000166 | IEA | nucleotide binding |
| GO:0003676 | IEA | nucleic acid binding |
| GO:0004439 | IMP | phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity |
| GO:0005515 | IPI | protein binding |
| GO:0006836 | IMP | neurotransmitter transport |
| GO:0007612 | IMP | learning |
| GO:0016082 | IMP | synaptic vesicle priming |
| GO:0016191 | IMP | synaptic vesicle uncoating |
| GO:0030117 | IDA | membrane coat |
| GO:0030118 | TAS | clathrin coat |
| GO:0034595 | IMP | phosphatidylinositol phosphate 5-phosphatase activity |
| GO:0046488 | IMP | phosphatidylinositol metabolic process |
| GO:0046855 | IMP | inositol phosphate dephosphorylation |
| GO:0046856 | IMP | phosphatidylinositol dephosphorylation |
| GO:0048015 | TAS | phosphatidylinositol-mediated signaling |
| GO:0048488 | IMP | synaptic vesicle endocytosis |
| GO:0048489 | IMP | synaptic vesicle transport |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000357345
|
SYNJ1-201 | protein_coding | Homo_sapiens | 0 | 4207 |
|
ENST00000382491
|
SYNJ1-202 | protein_coding | Homo_sapiens | 0 | 3960 |
|
ENST00000382499
|
SYNJ1-001 | protein_coding | Homo_sapiens | 0 | 5182 |
|
ENST00000429236
|
SYNJ1-002 | protein_coding | Homo_sapiens | 0 | 2547 |
|
ENST00000433931
|
SYNJ1-004 | protein_coding | Homo_sapiens | 0 | 5055 |
|
ENST00000438952
|
SYNJ1-003 | protein_coding | Homo_sapiens | 0 | 243 |
|
ENST00000456084
|
SYNJ1-006 | protein_coding | Homo_sapiens | 0 | 723 |
|
ENST00000464778
|
SYNJ1-007 | processed_transcript | Homo_sapiens | 0 | 619 |
|
ENST00000467445
|
SYNJ1-005 | retained_intron | Homo_sapiens | 0 | 337 |
