C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: caveolin 1, caveolae protein, 22kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000456473 CAV1-007 ENSG00000105974 9606 + 7:116525982-116559257 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyLungMuscleOvaryPlacentaTestisENST00000456473
Transcript ID Breast Kidney Lung Muscle Ovary Placenta Testis
ENST00000456473 16.467±0.00 5.041±0.00 59.216±0.00 10.361±0.00 13.888±6.17 194.871±0.00 17.443±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SP CIL_0007SP_0001 VISTA 7:116053609-116657055
CIL_00063M CIL_00063M_0002 CGP 7:116287380-116561184
CIL_00063L CIL_00063L_0002 CGP 7:116524785-116798386

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0005901 IEA caveola

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115453 Cav1-002 protein_coding Mus_musculus 0 693
ENSMUST00000115454 Cav1-007 protein_coding Mus_musculus 0 693
ENSMUST00000115456 Cav1-008 protein_coding Mus_musculus 0 693
ENSMUST00000007799 Cav1-001 protein_coding Mus_musculus 0 693
ENSMUST00000177234 Cav1-010 nonsense_mediated_decay Mus_musculus 0 612
ENSMUST00000115455 Cav1-009 protein_coding Mus_musculus 0 472
ENSMUST00000123439 Cav1-006 protein_coding Mus_musculus 0 326
ENSMUST00000130505 Cav1-003 protein_coding Mus_musculus 0 254
ENSMUST00000133065 Cav1-004 processed_transcript Mus_musculus 0 252
ENSMUST00000150901 Cav1-005 protein_coding Mus_musculus 0 252

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