C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SET pseudogene 20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000457046 SETP20-001 ENSG00000225094 9606 - 4:109553243-109554094 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000457046
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000457046 0.073±0.00 0.013±0.00 0.061±0.00 0.012±0.00 0.171±0.00 0.034±0.00 0.087±0.00 0.039±0.00 0.217±0.07 0.066±0.03 0.128±0.00 0.031±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102866 Set-001 protein_coding Mus_musculus 0 905
ENSMUST00000067996 Set-002 protein_coding Mus_musculus 0 898
ENSMUST00000125824 Set-005 processed_transcript Mus_musculus 0 898
ENSMUST00000183511 Gm9531-001 transcribed_processed_pseudogene Mus_musculus 0 850
ENSMUST00000118921 Gm11877-001 processed_pseudogene Mus_musculus 0 819
ENSMUST00000121098 Gm12642-001 processed_pseudogene Mus_musculus 0 749
ENSMUST00000134364 Set-004 protein_coding Mus_musculus 0 749
ENSMUST00000120309 Gm14746-001 processed_pseudogene Mus_musculus 0 664
ENSMUST00000137291 Set-006 processed_transcript Mus_musculus 0 608
ENSMUST00000149578 Set-003 protein_coding Mus_musculus 0 514
ENSDART00000023834 setb-001 protein_coding Danio_rerio 0 418
ENSMUST00000055820 Gm9531-002 processed_transcript Mus_musculus 0 233

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