C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7 pseudogene 32
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000457119 RPL7P32-001 ENSG00000231006 9606 + 7:108510233-108510976 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000457119
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000457119 0.245±0.00 0.404±0.00 1.019±0.00 0.257±0.16 0.160±0.04 0.368±0.04 0.358±0.19 0.149±0.00 0.091±0.03 0.276±0.19 0.227±0.00 0.227±0.21 0.514±0.00 0.136±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PF CIL_0008PF_0001 VISTA 7:108074195-108676805
CIL_0008CE CIL_0008CE_0001 VISTA 7:108074285-108676732

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058437 Rpl7-001 protein_coding Mus_musculus 0 870
ENSMUST00000119853 Gm12174-001 processed_pseudogene Mus_musculus 0 843
ENSMUST00000027054 Gm5045-201 processed_pseudogene Mus_musculus 0 826
ENSMUST00000118173 Gm6274-001 processed_pseudogene Mus_musculus 0 787
ENSMUST00000118692 Gm12090-001 processed_pseudogene Mus_musculus 0 695
ENSMUST00000118553 Gm8534-001 processed_pseudogene Mus_musculus 0 680
ENSMUST00000148424 1700073E17Rik-001 transcribed_processed_pseudogene Mus_musculus 0 632
ENSMUST00000152419 1700073E17Rik-002 processed_transcript Mus_musculus 0 632
ENSMUST00000122189 Gm5392-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000141217 Rpl7-002 retained_intron Mus_musculus 0 553
ENSMUST00000117062 Gm15159-001 processed_pseudogene Mus_musculus 0 551
ENSMUST00000136180 1700073E17Rik-004 processed_transcript Mus_musculus 0 518
ENSMUST00000151017 Rpl7-005 retained_intron Mus_musculus 0 283
ENSMUST00000140597 Rpl7-006 processed_transcript Mus_musculus 0 283

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