C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: small G protein signaling modulator 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000457767 SGSM3-004 ENSG00000100359 9606 + 22:40370591-40406223 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderKidneyENST00000457767
Transcript ID Bladder Kidney
ENST00000457767 5.797±0.00 7.712±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005W1 CIL_0005W1_0001 CGP 22:40370591-40636702

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005097 IEA Rab GTPase activator activity
GO:0032313 IEA regulation of Rab GTPase activity
GO:0032851 IEA positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000124845 Sgsm3-002 processed_transcript Mus_musculus 0 1092
ENSMUST00000139517 Sgsm3-001 protein_coding Mus_musculus 0 1072
ENSMUST00000042506 Sgsm3-201 protein_coding Mus_musculus 0 1072
ENSMUST00000138550 Sgsm3-007 retained_intron Mus_musculus 0 350
ENSMUST00000154904 Sgsm3-008 protein_coding Mus_musculus 1e-21 108

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