C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000460492 RP11-464D20.2-001 ENSG00000239246 9606 - 17:62516321-62516767 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000460492
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000460492 0.638±0.00 0.812±0.00 0.677±0.00 1.365±0.00 0.213±0.00 0.284±0.00 0.248±0.00 0.360±0.00 0.879±0.77 0.565±0.14 1.223±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056B CIL_00056B_0002 CGP 17:62423867-62615481
CIL_000563 CIL_000563_0002 CGP 17:62458658-62693597

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000127484 Rps10-ps2-001 processed_pseudogene Mus_musculus 0 424
ENSMUST00000178774 Rps10-201 protein_coding Mus_musculus 0 424
ENSMUST00000145226 Rps10-004 retained_intron Mus_musculus 0 424
ENSMUST00000155071 Rps10-006 processed_transcript Mus_musculus 0 424
ENSMUST00000025052 Rps10-002 protein_coding Mus_musculus 0 424
ENSMUST00000114881 Rps10-003 protein_coding Mus_musculus 0 424
ENSMUST00000114882 Rps10-001 protein_coding Mus_musculus 0 424
ENSMUST00000152982 Rps10-007 processed_transcript Mus_musculus 0 337
ENSMUST00000120308 Rps10-ps4-001 processed_pseudogene Mus_musculus 0 279

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