C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: T-cell lymphoma invasion and metastasis 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000461783 TIAM2-005 ENSG00000146426 9606 + 6:154832697-155257723 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00055J CIL_00055J_0001 CGP 6:154733325-155257723
CIL_00055I CIL_00055I_0001 CGP 6:154832697-155314493

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005057 IEA receptor signaling protein activity
GO:0005085 TAS guanyl-nucleotide exchange factor activity
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005096 IEA GTPase activator activity
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0007165 IEA signal transduction
GO:0007264 TAS small GTPase mediated signal transduction
GO:0016020 IEA membrane
GO:0032321 IEA positive regulation of Rho GTPase activity
GO:0035023 IEA regulation of Rho protein signal transduction
GO:0035556 IEA intracellular signal transduction
GO:0042995 IEA cell projection
GO:0043065 TAS positive regulation of apoptotic process
GO:0043547 IEA positive regulation of GTPase activity
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0048011 TAS neurotrophin TRK receptor signaling pathway
GO:0051056 TAS regulation of small GTPase mediated signal transduction
GO:0070062 IDA extracellular vesicular exosome
GO:0097190 TAS apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169838 Tiam2-202 protein_coding Mus_musculus 0 2558
ENSMUST00000072156 Tiam2-201 protein_coding Mus_musculus 0 2558
ENSMUST00000076734 Scaf8-201 protein_coding Mus_musculus 0 974
ENSDART00000110751 tiam1a-201 protein_coding Danio_rerio 0 217
ENSDART00000143978 tiam1a-001 protein_coding Danio_rerio 0 217
ENSDART00000131640 tiam1a-002 protein_coding Danio_rerio 2.00386e-43 183

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