C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PDZ and LIM domain 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000462597 PDLIM4-006 ENSG00000131435 9606 + 5:132270972-132272063 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonLungMuscleOvaryENST00000462597
Transcript ID Adipose Adrenal Breast Colon Lung Muscle Ovary
ENST00000462597 2.807±0.00 11.549±0.00 14.559±0.00 13.838±0.00 8.294±0.00 0.795±0.00 7.921±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093D CIL_00093D_0001 VISTA 5:131965137-132566411
CIL_0007RF CIL_0007RF_0001 VISTA 5:131967147-132570227

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000093109 Pdlim4-003 protein_coding Mus_musculus 0 315
ENSMUST00000018755 Pdlim4-001 protein_coding Mus_musculus 0 315
ENSMUST00000144477 Pdlim4-005 protein_coding Mus_musculus 4.00001e-41 172

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