C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: PDZ and LIM domain 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000144477 Pdlim4-005 ENSMUSG00000020388 10090 - 11:54055920-54064796 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSMUST00000144477
Transcript ID Liver
ENSMUST00000144477 0.640±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RF CIL_0007RF_0002 VISTA 11:53756663-54359415
CIL_00093D CIL_00093D_0002 VISTA 11:53760072-54361368

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253754 PDLIM4-001 protein_coding Homo_sapiens 0 420
ENST00000379018 PDLIM4-002 protein_coding Homo_sapiens 0 420
ENST00000418373 PDLIM4-004 protein_coding Homo_sapiens 0 427
ENST00000462597 PDLIM4-006 retained_intron Homo_sapiens 4.00001e-41 172
ENST00000474421 PDLIM4-003 retained_intron Homo_sapiens 3e-38 163
ENST00000484620 PDLIM4-005 processed_transcript Homo_sapiens 9.80909e-45 183

Loading