C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: stabilin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000462741 STAB1-006 ENSG00000010327 9606 + 3:52521361-52524493 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalLiverENST00000462741
Transcript ID Adrenal Liver
ENST00000462741 66.688±0.00 18.038±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WP CIL_0007WP_0001 VISTA 3:52127966-52731115

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161129 Stab1-004 retained_intron Mus_musculus 0 1059
ENSMUST00000036618 Stab1-001 protein_coding Mus_musculus 0 1059
ENSMUST00000162169 Stab1-006 retained_intron Mus_musculus 0 689
ENSMUST00000159480 Stab1-007 retained_intron Mus_musculus 0 442
ENSMUST00000160720 Stab1-005 retained_intron Mus_musculus 0 374
ENSMUST00000159249 Stab1-008 protein_coding Mus_musculus 0 278
ENSMUST00000161631 Stab1-012 retained_intron Mus_musculus 0 261
ENSMUST00000160024 Stab1-013 protein_coding Mus_musculus 0 254
ENSMUST00000159208 Stab1-009 processed_transcript Mus_musculus 2e-38 165
ENSMUST00000090212 Nt5dc2-201 protein_coding Mus_musculus 0.000000000000001 90

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