C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: stabilin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159480 Stab1-007 ENSMUSG00000042286 10090 - 14:31139013-31140866 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENSMUST00000159480
Transcript ID Muscle
ENSMUST00000159480 3.533±0.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WP CIL_0007WP_0002 VISTA 14:30932335-31535522
CIL_00002S CIL_00002S_0002 CGP 14:31139013-31216946

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307076 NT5DC2-001 protein_coding Homo_sapiens 2e-17 95
ENST00000321725 STAB1-001 protein_coding Homo_sapiens 0 553
ENST00000422318 NT5DC2-016 protein_coding Homo_sapiens 2e-17 95
ENST00000462261 NT5DC2-005 retained_intron Homo_sapiens 0.000000000000003 88
ENST00000462681 STAB1-005 retained_intron Homo_sapiens 0 392
ENST00000462741 STAB1-006 retained_intron Homo_sapiens 0 442
ENST00000463947 NT5DC2-014 protein_coding Homo_sapiens 7e-18 95
ENST00000469989 STAB1-009 protein_coding Homo_sapiens 0 353
ENST00000479024 NT5DC2-004 retained_intron Homo_sapiens 2e-17 95
ENST00000481626 STAB1-004 retained_intron Homo_sapiens 0 422

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