C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: T-box, brain, 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000463544 TBR1-005 ENSG00000136535 9606 + 2:161416331-161423885 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartLungPlacentaENST00000463544
Transcript ID Adipose Breast Heart Lung Placenta
ENST00000463544 0.010±0.00 0.034±0.02 0.002±0.00 0.003±0.00 0.006±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008JH CIL_0008JH_0001 VISTA 2:160938384-161538940
CIL_0005L1 CIL_0005L1_0001 CGP 2:161308038-161425870
CIL_0003AH CIL_0003AH_0001 CGP 2:161416094-161985282

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048934 Tbr1-001 protein_coding Mus_musculus 0 1234
ENSMUST00000102737 Tbr1-002 protein_coding Mus_musculus 0 778
ENSMUST00000131538 Tbr1-003 processed_transcript Mus_musculus 0 344

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