C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 50 pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000463545 DDX50P2-001 ENSG00000240048 9606 - 3:154352136-154354799 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyMuscleOvaryPlacentaTestisENST00000463545
Transcript ID Adipose Adrenal Breast Colon Kidney Muscle Ovary Placenta Testis
ENST00000463545 0.038±0.00 0.034±0.00 0.009±0.00 0.004±0.00 0.009±0.00 0.004±0.00 0.015±0.00 0.016±0.00 0.021±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066D CIL_00066D_0001 CGP 3:154272546-154429715
CIL_000669 CIL_000669_0001 CGP 3:154337672-155183729

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020270 Ddx50-201 protein_coding Mus_musculus 0 2433
ENSMUST00000189949 RP23-230A14.1-001 processed_pseudogene Mus_musculus 0 2311
ENSMUST00000121247 Gm14980-001 processed_pseudogene Mus_musculus 0 492

Loading