C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RAB, member of RAS oncogene family-like 2B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000464678 RABL2B-012 ENSG00000079974 9606 - 22:50769782-50783286 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000464678
Transcript ID Muscle
ENST00000464678 0.433±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066R CIL_00066R_0001 CGP 22:50738196-50783663

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000165747 Rabl2-004 retained_intron Mus_musculus 0 544
ENSMUST00000023294 Rabl2-001 protein_coding Mus_musculus 0 479
ENSMUST00000171580 Rabl2-008 nonsense_mediated_decay Mus_musculus 0 337
ENSMUST00000172053 Rabl2-006 nonsense_mediated_decay Mus_musculus 0 327
ENSMUST00000170126 Rabl2-009 nonsense_mediated_decay Mus_musculus 0 219
ENSMUST00000172074 Rabl2-011 retained_intron Mus_musculus 0 219
ENSMUST00000163376 Rabl2-003 retained_intron Mus_musculus 0 207
ENSMUST00000171142 Rabl2-007 processed_transcript Mus_musculus 3e-27 126

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