C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000085519 Anp32a-001 ENSMUSG00000032249 10090 + 9:62341329-62378812 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000085519
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000085519 16.392±6.01 16.177±0.00 20.200±0.58 37.049±10.49 12.579±4.18 7.811±2.13 16.386±2.09 18.781±7.09 23.725±10.74 37.189±3.92 8.164±0.78 17.134±8.84 9.327±3.98 2.230±0.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008FN CIL_0008FN_0002 VISTA 9:62114649-62715677
CIL_00080E CIL_00080E_0002 VISTA 9:62138578-62752434

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 ISS cytoplasm
GO:0005783 ISS endoplasmic reticulum
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0016363 IPI nuclear matrix
GO:0048471 ISS perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000266594 ANP32D-001 protein_coding Homo_sapiens 0 887
ENST00000267918 ANP32A-006 processed_transcript Homo_sapiens 0 1085
ENST00000409628 ANP32A-003 nonsense_mediated_decay Homo_sapiens 0 935
ENST00000465139 ANP32A-001 protein_coding Homo_sapiens 0 1485
ENST00000483551 ANP32A-002 processed_transcript Homo_sapiens 0 789
ENST00000486054 ANP32A-004 retained_intron Homo_sapiens 0 523
ENST00000495420 ANP32A-008 retained_intron Homo_sapiens 0 676
ENST00000495764 ANP32A-005 processed_transcript Homo_sapiens 0 350
ENST00000559548 ANP32AP1-001 transcribed_processed_pseudogene Homo_sapiens 0 686
ENST00000560303 ANP32A-010 protein_coding Homo_sapiens 0 832
ENST00000560832 ANP32AP1-002 processed_transcript Homo_sapiens 0 957

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