C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L22
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000465335 RPL22-006 ENSG00000116251 9606 - 1:6192930-6209389 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019L CIL_00019L_0002 CGP 1:6181269-6221299

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000127659 Rpl22-005 processed_transcript Mus_musculus 0 283
ENSMUST00000188151 Rpl22-201 protein_coding Mus_musculus 0 278
ENSMUST00000139685 Rpl22-002 protein_coding Mus_musculus 0 278
ENSMUST00000103191 Rpl22-001 protein_coding Mus_musculus 0 278
ENSMUST00000142735 Rpl22-003 processed_transcript Mus_musculus 0 278
ENSMUST00000121451 Gm12005-001 processed_pseudogene Mus_musculus 0 255
ENSMUST00000118652 Rpl22-ps1-001 processed_pseudogene Mus_musculus 0 246
ENSMUST00000126519 Rpl22-004 processed_transcript Mus_musculus 1.4013e-45 187
ENSMUST00000180176 Gm9457-201 processed_pseudogene Mus_musculus 9.99967e-42 174
ENSMUST00000156445 Rpl22-007 processed_transcript Mus_musculus 9.99967e-42 174
ENSMUST00000150485 Rpl22-006 processed_transcript Mus_musculus 1e-36 158
ENSMUST00000134269 Rnf207-004 retained_intron Mus_musculus 6e-34 148
ENSMUST00000143968 Rnf207-006 retained_intron Mus_musculus 6e-34 148
ENSMUST00000146496 Rnf207-005 retained_intron Mus_musculus 4e-21 106
ENSMUST00000123133 Rnf207-003 retained_intron Mus_musculus 4e-21 106
ENSMUST00000145311 Rnf207-002 retained_intron Mus_musculus 4e-21 106
ENSMUST00000130008 Rnf207-001 nonsense_mediated_decay Mus_musculus 4e-21 106
ENSMUST00000170820 Rnf207-011 protein_coding Mus_musculus 4e-21 106
ENSMUST00000076183 Rnf207-010 protein_coding Mus_musculus 4e-21 106

Loading