C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00019L_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000070437-ENSDARG00000091126 CGP 7955 11:30529296-30554461
GeneTranscriptPositionBiotype
ENSDARG00000070437 (rpl22)
ribosomal protein L22 		ENSDART00000103368 (rpl22-003) 30529538-30534710 processed_transcript
ENSDART00000125753 (rpl22-001) 30529296-30534787 protein_coding
ENSDART00000132092 (rpl22-002) 30529530-30534692 processed_transcript
ENSDARG00000091126 (RNF207 (2 of 2))
ring finger protein 207 		ENSDART00000024318 (RNF207 (2 of 2)-201) 30550587-30554461 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00019L_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000116251-ENSG00000158286 CGP 9606 1:6181269-6221299
GeneTranscriptPositionBiotype
ENSG00000116237 (ICMT)
isoprenylcysteine carboxyl methyltransferase 		ENST00000343813 (ICMT-001) 6221193-6235940 protein_coding
ENST00000474756 (ICMT-006) 6224599-6235972 nonsense_mediated_decay
ENST00000489498 (ICMT-002) 6223491-6235972 nonsense_mediated_decay
ENST00000495791 (ICMT-005) 6221898-6223502 processed_transcript
ENSG00000116251 (RPL22)
ribosomal protein L22 		ENST00000234875 (RPL22-001) 6185020-6199612 protein_coding
ENST00000462296 (RPL22-008) 6192927-6203494 protein_coding
ENST00000465335 (RPL22-006) 6192930-6209389 protein_coding
ENST00000465387 (RPL22-005) 6186723-6199553 protein_coding
ENST00000471204 (RPL22-007) 6186692-6209244 protein_coding
ENST00000480661 (RPL22-003) 6186575-6199563 retained_intron
ENST00000484532 (RPL22-004) 6181269-6197757 protein_coding
ENST00000497965 (RPL22-002) 6186615-6200842 protein_coding

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00019L_0001ENSDARG00000070437ENSDART00000103368ENSDART00000125753ENSDART00000132092ENSDARG00000091126ENSDART00000024318CIL_00019L_0002ENSG00000116237ENST00000343813ENST00000474756ENST00000489498ENST00000495791ENSG00000116251ENST00000234875ENST00000462296ENST00000465335ENST00000465387ENST00000471204ENST00000480661ENST00000484532ENST00000497965
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00019L_0001ENSDARG00000070437ENSDART00000103368ENSDART00000125753ENSDARG00000091126ENSDART00000024318CIL_00019L_0002ENSG00000116237ENST00000343813ENST00000489498ENSG00000116251ENST00000234875ENST00000465387ENST00000471204ENST00000480661ENST00000497965
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000070437 ENSDART00000103368 N/A N/A N/A 187.498±146.28 N/A N/A 995.513±758.89 1247.830±0.00 99.188±0.00 N/A 193.903±0.00 N/A N/A N/A
ENSDART00000125753 N/A N/A N/A 39.925±42.54 N/A N/A 199.846±274.62 102.145±91.81 227.808±0.00 N/A 303.152±0.00 N/A N/A N/A
ENSDART00000132092 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000091126 ENSDART00000024318 N/A N/A N/A N/A N/A N/A 10.163±0.00 0.343±0.00 N/A N/A 1.194±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000116237 ENST00000343813 18.055±0.00 19.852±0.00 3.662±0.00 5.722±2.48 19.937±0.00 10.838±6.26 13.408±0.00 24.462±0.00 7.306±0.00 5.971±2.27 14.503±9.35 13.954±0.00 21.334±0.57 16.834±0.00
ENST00000474756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489498 N/A N/A N/A N/A N/A N/A 13.331±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000495791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000116251 ENST00000234875 101.213±0.00 105.689±0.00 18.942±0.00 43.981±14.20 62.732±27.53 89.215±58.28 23.369±13.23 49.495±22.45 33.645±9.16 52.535±26.89 40.984±18.18 164.048±63.39 75.703±6.66 57.574±27.20
ENST00000462296 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465387 N/A N/A N/A N/A N/A N/A N/A N/A 42.908±0.00 115.627±0.00 N/A 701.084±0.00 238.855±6.91 N/A
ENST00000471204 N/A N/A 19.150±0.00 43.443±0.00 58.868±0.00 49.246±0.00 29.064±0.00 52.219±0.00 83.647±0.00 43.129±0.00 58.314±0.00 118.112±0.00 119.488±0.00 N/A
ENST00000480661 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.627±0.00
ENST00000484532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497965 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 228.756±0.00 111.950±0.00 33.980±0.00

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