C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: stromal interaction molecule 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000465503 STIM2-002 ENSG00000109689 9606 + 4:26860841-27023966 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000465503
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000465503 3.611±0.00 7.117±0.00 0.489±0.00 3.779±1.57 2.850±0.12 2.493±0.00 1.222±0.00 1.546±0.57 1.484±0.28 3.820±0.66 0.824±0.00 3.383±1.80 2.084±0.87 2.230±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TT CIL_0002TT_0002 CGP 4:26576437-27025381
CIL_00079S CIL_00079S_0001 CGP 4:26857678-31146805

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005246 IEA calcium channel regulator activity
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0032237 IEA activation of store-operated calcium channel activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117661 Stim2-001 protein_coding Mus_musculus 0 3352
ENSMUST00000071083 Stim2-004 protein_coding Mus_musculus 0 3332
ENSMUST00000152812 Stim2-002 protein_coding Mus_musculus 0 1914
ENSMUST00000129109 Stim2-005 retained_intron Mus_musculus 0 538
ENSMUST00000155608 Stim2-003 processed_transcript Mus_musculus 0 520

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