C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: stromal interaction molecule 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000467011 STIM2-003 ENSG00000109689 9606 + 4:26860794-27024187 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000467011
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000467011 0.985±0.00 0.882±0.00 0.513±0.00 0.276±0.00 1.260±0.00 0.695±0.00 1.317±0.00 0.359±0.14 2.503±1.20 2.084±1.64 3.204±0.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TT CIL_0002TT_0002 CGP 4:26576437-27025381
CIL_00079S CIL_00079S_0001 CGP 4:26857678-31146805

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117661 Stim2-001 protein_coding Mus_musculus 0 1910
ENSMUST00000071083 Stim2-004 protein_coding Mus_musculus 0 1810
ENSMUST00000152812 Stim2-002 protein_coding Mus_musculus 0 1783
ENSMUST00000155608 Stim2-003 processed_transcript Mus_musculus 0 520
ENSMUST00000129109 Stim2-005 retained_intron Mus_musculus 0 302

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