C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syntaxin 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000467096 STX16-003 ENSG00000124222 9606 + 20:58651866-58676328 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000697 CIL_000697_0002 CGP 20:58459101-58679526

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005484 IDA SNAP receptor activity
GO:0005515 IPI protein binding
GO:0005730 IDA nucleolus
GO:0005737 TAS cytoplasm
GO:0005925 IDA focal adhesion
GO:0006886 IEA intracellular protein transport
GO:0006891 IEA intra-Golgi vesicle-mediated transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016192 IEA vesicle-mediated transport
GO:0031201 IEA:TAS SNARE complex
GO:0042147 IDA retrograde transport, endosome to Golgi
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087908 Stx16-001 protein_coding Mus_musculus 0 215
ENSMUST00000044638 Stx16-201 protein_coding Mus_musculus 3e-33 147
ENSMUST00000156054 Stx16-005 protein_coding Mus_musculus 8e-29 132

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