C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syntaxin 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000044638 Stx16-201 ENSMUSG00000027522 10090 + 2:174077058-174099770 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonLiverLungMuscleOvaryPlacentaENSMUST00000044638
Transcript ID Bladder Brain Breast Colon Liver Lung Muscle Ovary Placenta
ENSMUST00000044638 5.921±0.00 13.548±0.00 3.327±0.99 3.583±0.00 4.781±1.62 5.842±0.00 2.054±0.56 15.042±0.00 7.065±3.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000696 CIL_000696_0003 CGP 2:174076308-174123070

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005484 IEA SNAP receptor activity
GO:0005794 IDA Golgi apparatus
GO:0006886 IEA intracellular protein transport
GO:0006891 IEA intra-Golgi vesicle-mediated transport
GO:0031201 IEA SNARE complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355957 STX16-004 protein_coding Homo_sapiens 0 464
ENST00000358029 STX16-010 protein_coding Homo_sapiens 0 1035
ENST00000359617 STX16-018 protein_coding Homo_sapiens 0 987
ENST00000361770 STX16-201 protein_coding Homo_sapiens 3e-33 147
ENST00000361830 STX16-202 protein_coding Homo_sapiens 0 946
ENST00000371132 STX16-001 protein_coding Homo_sapiens 0 464
ENST00000371141 STX16-002 protein_coding Homo_sapiens 0 1096
ENST00000464640 STX16-005 nonsense_mediated_decay Homo_sapiens 2e-33 147
ENST00000467096 STX16-003 nonsense_mediated_decay Homo_sapiens 3e-33 147
ENST00000468590 STX16-012 processed_transcript Homo_sapiens 0 710
ENST00000493301 STX16-015 nonsense_mediated_decay Homo_sapiens 0 488
ENST00000496003 STX16-014 processed_transcript Homo_sapiens 0 462
ENST00000530122 STX16-NPEPL1-001 nonsense_mediated_decay Homo_sapiens 0 1038

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